Dr John Markham

  • Room: Level: 02 Room:
  • Building: Electrical and Electronic Engineering
  • Campus: Parkville

Biography

Dr John Markham is a Senior Researcher in the NICTA Victoria Research Laboratory in the Department of Electrical and Electronic Engineering at The University of Melbourne. Dr Markham also collaborates with the Immunology Division at the Walter and Eliza Hall Institute (WEHI).

Recent publications

  1. Markham J, Yerneni S, Ryland GL, San Leong H, Fellowes A, Thompson E, De Silva W, Kumar A, Lupat R, Li J, Ellul J, Fox S, Dickinson M, Papenfuss A, Blombery P. CNspector: a web-based tool for visualisation and clinical diagnosis of copy number variation from next generation sequencing. Scientific Reports. Nature Publishing Group. 2019, Vol. 9, Issue 1. DOI: 10.1038/s41598-019-42858-8
  2. Zhu L, Shahid M, Markham J, Browning G, Hadjinoormohammadi A, Marenda M. Comparative genomic analyses of Mycoplasma synoviae vaccine strain MS-H and its wild-type parent strain 86079/7NS: implications for the identification of virulence factors and applications in diagnosis of M. synoviae. Avian Pathology. Carfax Publishing. 2019, Vol. 48, Issue 6. DOI: 10.1080/03079457.2019.1637514
  3. Blombery PA, Ryland GL, Markham J, Guinto J, Wall M, McBean M, Jones K, Thompson E, Cameron D, Papenfuss A, Prince H, Dickinson M, Westerman D. Detection of clinically relevant early genomic lesions in B-cell malignancies from circulating tumour DNA using a single hybridisation-based next generation sequencing assay. BRITISH JOURNAL OF HAEMATOLOGY. Wiley-Blackwell Publishing. 2018, Vol. 183, Issue 1. DOI: 10.1111/bjh.14919
  4. Zhu L, Shahid MA, Markham J, Browning G, Noormohammadi A, Marenda M. Genome analysis of Mycoplasma synoviae strain MS-H, the most common M. synoviae strain with a worldwide distribution. BMC Genomics. Biomed Central. 2018, Vol. 19, Issue 1. DOI: 10.1186/s12864-018-4501-8
  5. Ryland GL, Jones K, Chin M, Markham J, Aydogan E, Kankanige Y, Caruso M, Guinto J, Dickinson M, Prince H, Yong K, Blombery P. Novel genomic findings in multiple myeloma identified through routine diagnostic sequencing. JOURNAL OF CLINICAL PATHOLOGY. BMJ Publishing Group. 2018, Vol. 71, Issue 10. DOI: 10.1136/jclinpath-2018-205195
  6. Zhou J, Markham J, Duffy KR, Hodgkin P. Stochastically Timed Competition Between Division and Differentiation Fates Regulates the Transition From B Lymphoblast to Plasma Cell. FRONTIERS IN IMMUNOLOGY. Frontiers Research Foundation. 2018, Vol. 9. DOI: 10.3389/fimmu.2018.02053
  7. Yannakou C, Jones K, McBean M, Thompson E, Ryland GL, Doig K, Markham J, Westerman D, Blombery PA. ASXL1 c.1934dup;p.Gly646Trpfs*12-a true somatic alteration requiring a new approach. BLOOD CANCER JOURNAL. Nature Publishing Group. 2017, Vol. 7, Issue 12. DOI: 10.1038/s41408-017-0025-8
  8. Kan A, Markham J, Chakravorty R, Bailey J, Leckie C. Ranking cell tracking systems without manual validation. PATTERN RECOGNITION LETTERS. Elsevier Science. 2015, Vol. 53. DOI: 10.1016/j.patrec.2014.11.005
  9. Potts K, Sargeant T, Markham J, Shi W, Biben C, Josefsson E, Whitehead L, Rogers K, Liakhovitskaia A, Smyth G, Kile B, Medvinsky A, Alexander W, Hilton D, Taoudi S. A lineage of diploid platelet-forming cells precedes polyploid megakaryocyte formation in the mouse embryo. BLOOD. American Society of Hematology. 2014, Vol. 124, Issue 17. DOI: 10.1182/blood-2014-02-559468
  10. Chakravorty R, Rawlinson D, Zhang A, Markham J, Dowling M, Wellard C, Zhou J, Hodgkin P. Labour-Efficient In Vitro Lymphocyte Population Tracking and Fate Prediction Using Automation and Manual Review. PLOS ONE. Public Library of Science. 2014, Vol. 9, Issue 1. DOI: 10.1371/journal.pone.0083251
  11. Budden D, Hurley D, Cursons J, Markham J, Davis M, Crampin E. Predicting expression: the complementary power of histone modification and transcription factor binding data. EPIGENETICS & CHROMATIN. Biomed Central. 2014, Vol. 7. DOI: 10.1186/1756-8935-7-36
  12. Dowling M, Kan A, Heinzel S, Zhou J, Marchingo J, Wellard C, Markham J, Hodgkin P. Stretched cell cycle model for proliferating lymphocytes. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. National Academy of Sciences. 2014, Vol. 111, Issue 17. DOI: 10.1073/pnas.1322420111
  13. Kan A, Leckie C, Bailey J, Markham J, Chakravorty R. Measures for ranking cell trackers without manual validation. PATTERN RECOGNITION. Pergamon-Elsevier Science. 2013, Vol. 46, Issue 11. DOI: 10.1016/j.patcog.2013.04.007
  14. Shahid M, Markham P, Markham J, Marenda M, Hadjinoormohammadi A. Mutations in GTP Binding Protein Obg of Mycoplasma synoviae Vaccine Strain MS-H: Implications in Temperature-Sensitivity Phenotype. PLOS ONE. Public Library of Science. 2013, Vol. 8, Issue 9. DOI: 10.1371/journal.pone.0073954
  15. Lee S, Devlin J, Markham J, Hadjinoormohammadi A, Browning G, Ficorilli N, Hartley C, Markham P. Phylogenetic and Molecular Epidemiological Studies Reveal Evidence of Multiple Past Recombination Events between Infectious Laryngotracheitis Viruses. PLOS ONE. Public Library of Science. 2013, Vol. 8, Issue 2. DOI: 10.1371/journal.pone.0055121

View a full list of publications on the University of Melbourne’s ‘Find An Expert’ profile